Academia and Industry Collaboration for Digital Pathology

OUTREACH – RRI: Responsible, Research and Innovation

One of the outreach actions of the AIDPATH project is the preparation of a set of activities such as challenges, contests and surveys, to foster the development of a set of tools for digital pathology in an efficient and innovative way. These activities will cover all AIDPATH WPs: 1) Image quality assessment, 2) Advanced image analysis for whole slide images, 3) Evaluation and quantification of biomarkers and 4) Evaluation of the processing tools.

 

Image Quality Survey for WSI

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The aim of this survey is to evaluate image quality of a set of WSI digitalized with different scanners from slides prepared at 4 different Hospitals. All the slides were rotated and scanned by all the Hospitals. One open questions for the adoption of WSI into clinical applications is image quality. The main concerns is if WSI can replace conventional light microscopy to render diagnoses. Is the quality of digital image good enough? WSI quality should be analysed at different levels, such as focus, color, contrast, noise and distorted tissue artifacts. Another aspect to be analysed is the effect of display and monitors. All these issues are taking into account in this survey open to pathologists. The survey will be done at 4 stages. The 1st stage is already published and contains 50 images of breast Her2. The 2nd stage will be Ki67,  the 3rd stage will consider other biomarkers such as ER and PR and finally the 4th stage will be with HEO. Register >>>

 

Her2 Contest

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The purpose of this challenge is to test a set of tools for automated scoring of HER2 in whole-slide images (WSI) of breast cancer histology slides. For this contest, a dataset of about 100 WSI for training are provided linked with the ground-truth data in HER2 score and a % score given by pathologists, and 30 WSI for testing. The contest is open to all research groups in this area and the results will be discussed at the Nottingham Pathology Conference 2016 (organized by The Pathological Society of Great Britain & Ireland) during the 5th AIDPATH Workshop. For further details and Register >>>